SMTL ID : 9c28.1

Structure of endogenous Glutamine synthetase from rat model of Alzheimer's disease

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-10-mer

Ligands

20 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: E.134, H.253, E.338, R.340 Ligands: MN.2 No protein-ligand interaction detected (PLIP) MN.2: 5 residues within 4Å: Chain A: E.134, E.136, E.196, E.203 Ligands: MN.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.203 MN.3: 5 residues within 4Å: Chain B: E.134, H.253, E.338, R.340 Ligands: MN.4 No protein-ligand interaction detected (PLIP) MN.4: 5 residues within 4Å: Chain B: E.134, E.136, E.196, E.203 Ligands: MN.3 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:E.203 MN.5: 5 residues within 4Å: Chain C: E.134, H.253, E.338, R.340 Ligands: MN.6 No protein-ligand interaction detected (PLIP) MN.6: 5 residues within 4Å: Chain C: E.134, E.136, E.196, E.203 Ligands: MN.5 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:E.203 MN.7: 5 residues within 4Å: Chain D: E.134, H.253, E.338, R.340 Ligands: MN.8 No protein-ligand interaction detected (PLIP) MN.8: 5 residues within 4Å: Chain D: E.134, E.136, E.196, E.203 Ligands: MN.7 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:E.203 MN.9: 5 residues within 4Å: Chain E: E.134, H.253, E.338, R.340 Ligands: MN.10 No protein-ligand interaction detected (PLIP) MN.10: 5 residues within 4Å: Chain E: E.134, E.136, E.196, E.203 Ligands: MN.9 1 PLIP interactions: 1 interactions with chain E Metal complexes: E:E.203 MN.11: 5 residues within 4Å: Chain F: E.134, H.253, E.338, R.340 Ligands: MN.12 No protein-ligand interaction detected (PLIP) MN.12: 5 residues within 4Å: Chain F: E.134, E.136, E.196, E.203 Ligands: MN.11 1 PLIP interactions: 1 interactions with chain F Metal complexes: F:E.203 MN.13: 5 residues within 4Å: Chain G: E.134, H.253, E.338, R.340 Ligands: MN.14 No protein-ligand interaction detected (PLIP) MN.14: 5 residues within 4Å: Chain G: E.134, E.136, E.196, E.203 Ligands: MN.13 1 PLIP interactions: 1 interactions with chain G Metal complexes: G:E.203 MN.15: 5 residues within 4Å: Chain H: E.134, H.253, E.338, R.340 Ligands: MN.16 No protein-ligand interaction detected (PLIP) MN.16: 5 residues within 4Å: Chain H: E.134, E.136, E.196, E.203 Ligands: MN.15 1 PLIP interactions: 1 interactions with chain H Metal complexes: H:E.203 MN.17: 5 residues within 4Å: Chain I: E.134, H.253, E.338, R.340 Ligands: MN.18 No protein-ligand interaction detected (PLIP) MN.18: 5 residues within 4Å: Chain I: E.134, E.136, E.196, E.203 Ligands: MN.17 1 PLIP interactions: 1 interactions with chain I Metal complexes: I:E.203 MN.19: 5 residues within 4Å: Chain J: E.134, H.253, E.338, R.340 Ligands: MN.20 No protein-ligand interaction detected (PLIP) MN.20: 5 residues within 4Å: Chain J: E.134, E.136, E.196, E.203 Ligands: MN.19 1 PLIP interactions: 1 interactions with chain J Metal complexes: J:E.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Samani, E.K. et al., Unveiling the structural proteome of an Alzheimer's disease rat brain model. Structure (2024)

Release Date

2024-12-11

Peptides

Glutamine synthetase: ABCDEFGHIJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

Glutamine synthetase