SMTL ID : 9c3f.1

Cryo-EM structure of E. coli AmpG

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)

LMT.1: 10 residues within 4Å: Chain A: Y.62, V.63, K.65, F.66, D.128, Y.155, S.361, A.362, A.365, V.366 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.63, A:F.66, A:A.362, A:A.365, A:V.366 Hydrogen bonds: A:K.65

1 x PEE: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine(Non-covalent)

PEE.2: 5 residues within 4Å: Chain A: L.57, F.64, W.86, T.450, A.453 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.57, A:F.64, A:W.86 Hydrogen bonds: A:Q.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sverak, H.E. et al., Cryo-EM characterization of the anydromuropeptide permease AmpG central to bacterial fitness and beta-lactam antibiotic resistance. Nat Commun (2024)

Release Date

2024-12-18

Peptides

Anhydromuropeptide permease,Soluble cytochrome b562: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Anhydromuropeptide permease,Soluble cytochrome b562