SMTL ID : 9c4d.1

The structure of 4 MntR homodimers bound to the promoter sequence of mnep

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-octamer

Ligands

16 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain C: E.11, H.77, E.99, E.102 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:E.11, C:H.77, C:E.99, C:E.102, C:E.102 MN.2: 4 residues within 4Å: Chain C: D.8, E.99, E.102, H.103 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:D.8, C:D.8, C:E.99, C:E.102, C:H.103 MN.3: 4 residues within 4Å: Chain D: E.11, H.77, E.99, E.102 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:E.11, D:H.77, D:E.99, D:E.102, D:E.102 MN.4: 4 residues within 4Å: Chain D: D.8, E.99, E.102, H.103 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:D.8, D:D.8, D:E.99, D:E.102, D:H.103 MN.5: 4 residues within 4Å: Chain E: E.11, H.77, E.99, E.102 5 PLIP interactions: 5 interactions with chain E Metal complexes: E:E.11, E:H.77, E:E.99, E:E.102, E:E.102 MN.6: 4 residues within 4Å: Chain E: D.8, E.99, E.102, H.103 5 PLIP interactions: 5 interactions with chain E Metal complexes: E:D.8, E:D.8, E:E.99, E:E.102, E:H.103 MN.7: 4 residues within 4Å: Chain F: E.11, H.77, E.99, E.102 5 PLIP interactions: 5 interactions with chain F Metal complexes: F:E.11, F:H.77, F:E.99, F:E.102, F:E.102 MN.8: 4 residues within 4Å: Chain F: D.8, E.99, E.102, H.103 5 PLIP interactions: 5 interactions with chain F Metal complexes: F:D.8, F:D.8, F:E.99, F:E.102, F:H.103 MN.9: 4 residues within 4Å: Chain G: E.11, H.77, E.99, E.102 5 PLIP interactions: 5 interactions with chain G Metal complexes: G:E.11, G:H.77, G:E.99, G:E.102, G:E.102 MN.10: 4 residues within 4Å: Chain G: D.8, E.99, E.102, H.103 5 PLIP interactions: 5 interactions with chain G Metal complexes: G:D.8, G:D.8, G:E.99, G:E.102, G:H.103 MN.11: 4 residues within 4Å: Chain H: E.11, H.77, E.99, E.102 5 PLIP interactions: 5 interactions with chain H Metal complexes: H:E.11, H:H.77, H:E.99, H:E.102, H:E.102 MN.12: 4 residues within 4Å: Chain H: D.8, E.99, E.102, H.103 5 PLIP interactions: 5 interactions with chain H Metal complexes: H:D.8, H:D.8, H:E.99, H:E.102, H:H.103 MN.13: 4 residues within 4Å: Chain I: E.11, H.77, E.99, E.102 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:E.11, I:H.77, I:E.99, I:E.102, I:E.102 MN.14: 4 residues within 4Å: Chain I: D.8, E.99, E.102, H.103 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:D.8, I:D.8, I:E.99, I:E.102, I:H.103 MN.15: 4 residues within 4Å: Chain J: E.11, H.77, E.99, E.102 5 PLIP interactions: 5 interactions with chain J Metal complexes: J:E.11, J:H.77, J:E.99, J:E.102, J:E.102 MN.16: 4 residues within 4Å: Chain J: D.8, E.99, E.102, H.103 5 PLIP interactions: 5 interactions with chain J Metal complexes: J:D.8, J:D.8, J:E.99, J:E.102, J:H.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shi, H. et al., Structural basis for transcription activation through cooperative recruitment of MntR. Nat Commun (2025)

Release Date

2024-08-14

Peptides

HTH-type transcriptional regulator MntR: CDEFGHIJ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

HTH-type transcriptional regulator MntR

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