SMTL ID : 9c4v.1

Menin mutant G331D in complex with MLL peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

hetero-1-1-mer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: Y.118, F.119, R.122, K.136 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.119 SO4.2: 6 residues within 4Å: Chain A: R.317, N.318, V.319, R.320, S.375, A.376 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:V.319, A:R.320, A:A.376 Water bridges: A:R.320, A:G.374 Salt bridges: A:R.320 SO4.3: 5 residues within 4Å: Chain A: R.93, G.96, G.154, L.155, R.156 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.154, A:R.156 Water bridges: A:R.93 Salt bridges: A:R.93, A:R.156

1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.4: 4 residues within 4Å: Chain A: R.57, L.60, T.61, Y.62 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.57, A:R.57, A:R.57

1 x PG0: 2-(2-METHOXYETHOXY)ETHANOL(Non-functional Binders)

PG0.5: 6 residues within 4Å: Chain A: W.111, L.114, S.115, Y.118, K.120, W.183 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.120

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 3 residues within 4Å: Chain A: A.76, R.77, A.80 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clegg, B.D. et al., Menin mutant G331D in complex with MLL peptide. To Be Published

Release Date

2025-05-14

Peptides

Menin: A
Histone-lysine N-methyltransferase 2A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Menin

Histone-lysine N-methyltransferase 2A

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