SMTL ID : 9cb1.1

Cryo-EM Structure of the Human Neutralizing Antibody 5-1 in Complex with Prefusion Human Metapneumovirus F Glycoprotein

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-3-mer

Ligands

3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain D: S.67 Chain G: K.171, N.172, R.175 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 5 residues within 4Å: Chain E: S.67 Chain H: K.171, N.172, R.175, M.189 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 7 residues within 4Å: Chain F: S.67 Chain H: D.62, D.183 Chain I: F.168, N.172, S.192, F.196 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:D.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abu-Shmais, A.A. et al., Potent cross-neutralizing RSV/hMPV antibody targeting antigenic site V. To Be Published

Release Date

2025-05-28

Peptides

5-1 Fab Heavy Chain Variable Domain: ABC
5-1 Fab Light Chain Variable Domain: DEF
Fusion glycoprotein F0: GHI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

5-1 Fab Heavy Chain Variable Domain

5-1 Fab Light Chain Variable Domain

Fusion glycoprotein F0

Related Entries With Identical Sequence