SMTL ID : 9cdg.1

MORC2 ATPase dead mutant - S87A

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.499, C.502, C.525, C.536 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.499, A:C.502, A:C.525, A:C.536 ZN.4: 4 residues within 4Å: Chain B: C.499, C.502, C.525, C.536 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.499, B:C.502, B:C.525, B:C.536

2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 17 residues within 4Å: Chain A: E.35, N.39, A.43, D.68, M.73, V.81, G.98, Q.99, Y.100, G.101, N.102, G.103, L.104, K.105, T.197, K.427 Ligands: MG.3 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:E.35, A:N.39, A:D.68, A:Q.99, A:Q.99, A:Y.100, A:G.101, A:N.102, A:G.103, A:L.104 Salt bridges: A:K.105, A:K.427 ATP.5: 18 residues within 4Å: Chain B: E.35, N.39, A.43, D.68, M.73, V.81, K.86, G.98, Q.99, Y.100, G.101, N.102, G.103, L.104, K.105, T.197, K.427 Ligands: MG.6 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:N.39, B:D.68, B:Q.99, B:Y.100, B:G.101, B:N.102, B:G.103, B:L.104, B:T.197 Salt bridges: B:K.86, B:K.105, B:K.427

3 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 5 residues within 4Å: Chain A: E.35, N.39, G.103, L.104 Ligands: ATP.2 No protein-ligand interaction detected (PLIP) MG.6: 4 residues within 4Å: Chain B: N.39, G.103, L.104 Ligands: ATP.5 No protein-ligand interaction detected (PLIP) MG.7: 4 residues within 4Å: Chain B: D.69, G.70, S.195, G.196 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.69, B:G.70, B:S.195, B:S.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, W. et al., MORC2 is a phosphorylation-dependent DNA compaction machine. Nat Commun (2025)

Release Date

2025-07-09

Peptides

ATPase MORC2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ATPase MORC2