SMTL ID : 9cga.1

Human DJ-1, 3 sec mixing with methylglyoxal, pink beam time-resolved serial crystallography, CrystFEL processed

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

homo-dimer

Ligands

2 x 4Y8: 1-hydroxypropan-2-one(Covalent)

4Y8.1: 10 residues within 4Å: Chain A: E.18, E.21, G.77, G.78, N.79, C.109, A.110, H.129, L.131, P.161 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.21, A:G.78, A:A.110 Water bridges: A:R.51, A:N.79 4Y8.2: 10 residues within 4Å: Chain B: E.18, E.21, G.77, G.78, N.79, C.109, A.110, H.129, L.131, P.161 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:E.21, B:G.78, B:A.110 Water bridges: B:R.51, B:N.79

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zielinski, K.A. et al., Resolving DJ-1 Glyoxalase Catalysis Using Mix-and-Inject Serial Crystallography at a Synchrotron. Biorxiv (2024)

Release Date

2025-03-12

Peptides

Protein deglycase DJ-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Protein deglycase DJ-1

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