SMTL ID : 9cgt.1

STRUCTURE OF CYCLODEXTRIN GLYCOSYLTRANSFERASE COMPLEXED WITH A THIO-MALTOPENTAOSE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x Z9E- 4SG- GLC- 4SG- GLC: alpha-D-glucopyranose-(1-4)-4-thio-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-4-thio-alpha-D-glucopyranose-(1-4)-1-thio-alpha-D-glucopyranose(Non-covalent)

Z9E-4SG-GLC-4SG-GLC.1: 17 residues within 4Å: Chain A: K.47, Y.89, N.94, H.98, Y.100, W.101, H.140, L.194, D.196, L.197, D.229, H.233, F.259, H.327, D.328, D.371, R.375 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.47, A:K.47, A:D.196, A:H.233 Water bridges: A:K.47, A:D.371, A:F.259

2 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: N.139, I.190, D.199, H.233 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:I.190, A:D.199, A:D.199, A:H.233, H2O.1 CA.3: 6 residues within 4Å: Chain A: D.27, N.29, N.32, N.33, G.51, D.53 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.27, A:N.29, A:G.51, A:D.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parsiegla, G. et al., Substrate binding to a cyclodextrin glycosyltransferase and mutations increasing the gamma-cyclodextrin production. Eur.J.Biochem. (1998)

Release Date

1998-10-14

Peptides

PROTEIN (CYCLODEXTRIN-GLYCOSYLTRANSFERASE): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN (CYCLODEXTRIN-GLYCOSYLTRANSFERASE)

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