SMTL ID : 9cl1.1

Particulate methane monooxygenase in 0.02% DDM

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-3-mer

Ligands

9 x CU: COPPER (II) ION(Non-covalent)

CU.1: 3 residues within 4Å: Chain A: H.1, H.105, H.107 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.1, A:H.105, A:H.107 CU.2: 4 residues within 4Å: Chain A: H.16, H.40, L.358, Q.372 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.16, A:H.40 CU.3: 3 residues within 4Å: Chain C: D.114, H.118, H.131 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:D.114, C:D.114, C:H.118, C:H.131 CU.4: 3 residues within 4Å: Chain D: D.114, H.118, H.131 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:D.114, D:D.114, D:H.118, D:H.131 CU.5: 3 residues within 4Å: Chain E: D.114, H.118, H.131 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:D.114, E:D.114, E:H.118, E:H.131 CU.6: 3 residues within 4Å: Chain F: H.1, H.105, H.107 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:H.1, F:H.105, F:H.107 CU.7: 4 residues within 4Å: Chain F: H.16, H.40, L.358, Q.372 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:H.16, F:H.40 CU.8: 3 residues within 4Å: Chain G: H.1, H.105, H.107 3 PLIP interactions: 3 interactions with chain G Metal complexes: G:H.1, G:H.105, G:H.107 CU.9: 4 residues within 4Å: Chain G: H.16, H.40, L.358, Q.372 2 PLIP interactions: 2 interactions with chain G Metal complexes: G:H.16, G:H.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tucci, F.J. et al., Structures of methane and ammonia monooxygenases in native membranes. Proc.Natl.Acad.Sci.USA (2025)

Release Date

2025-01-08

Peptides

Particulate methane monooxygenase alpha subunit: AFG
Particulate methane monooxygenase beta subunit: BHI
Methane monooxygenase, C subunit: CDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
Aa

F
Ab

G
Ac

B
Ca

H
Cb

I
Cc

C
Ba

D
Bb

E
Bc

Membrane

We predict this structure to be a membrane protein.
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Particulate methane monooxygenase alpha subunit

Particulate methane monooxygenase beta subunit

Methane monooxygenase, C subunit

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