SMTL ID : 9cpo.1

Infectious bronchitis virus core polymerase complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-2-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.297, C.303, C.308, C.312 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.297, A:C.303, A:C.308, A:C.312 ZN.2: 5 residues within 4Å: Chain A: C.489, F.572, H.643, C.646, C.647 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.489, A:H.643, A:C.646, A:C.647

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hoferle, P.J. et al., A genus-specific nsp12 region impacts polymerase assembly in Alpha- and Gammacoronaviruses. Biorxiv (2024)

Release Date

2024-07-31

Peptides

RNA-directed RNA polymerase nsp12: A
Non-structural protein 8: BD
Non-structural protein 7: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

D
D

C
C

RNA-directed RNA polymerase nsp12

Non-structural protein 8

Non-structural protein 7