SMTL ID : 9cq8.1

Dimeric 9C2 gamma delta TCR extracellular domain bound by Fab 2

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-2-mer

Ligands

4 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 3 residues within 4Å: Chain A: N.131 Chain B: I.135, L.137 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.2: 3 residues within 4Å: Chain A: I.157 Chain B: T.186, N.187 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.3: 3 residues within 4Å: Chain E: N.131 Chain F: I.135, L.137 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.4: 3 residues within 4Å: Chain E: I.157 Chain F: T.186, N.187 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hoque, M. et al., Structural characterization of two gamma delta TCR/CD3 complexes. Nat Commun (2025)

Release Date

2025-01-15

Peptides

9C2 TCR delta chain: AE
9C2 TCR gamma chain: BF
anti TCR variable delta 1 Fab heavy chain: CG
anti TCR variable delta 1 Fab light chain: DH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
D

B
B

F
F

C
C

G
G

D
E

H
H

9C2 TCR delta chain

9C2 TCR gamma chain

anti TCR variable delta 1 Fab heavy chain

anti TCR variable delta 1 Fab light chain

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