SMTL ID : 9csn.2 (1 other biounit)

Crystal structure of human ribonuclease 7 (RNase 7) in complex with 5'-adenosine monophosphate (5'-AMP)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: K.2, W.11, Q.15, T.35, K.39 Ligands: GOL.5 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.2, A:K.2, A:W.11 EDO.2: 5 residues within 4Å: Chain A: H.46, E.47, A.76, V.77, S.78 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.46, A:S.78 EDO.3: 5 residues within 4Å: Chain A: K.13, I.14, M.17, Q.18, P.19 No protein-ligand interaction detected (PLIP)

1 x BO3: BORIC ACID(Non-functional Binders)

BO3.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 9 residues within 4Å: Chain A: F.12, Q.15, H.16, K.39, N.42, V.123, H.124, L.125 Ligands: EDO.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.15, A:H.16, A:K.39, A:L.125 Water bridges: A:H.16, A:V.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tran, T.T.Q. et al., Crystal structure of human ribonuclease 7 (RNase 7) in complex with 5'-adenosine monophosphate (5'-AMP). To Be Published

Release Date

2025-07-30

Peptides

Ribonuclease 7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ribonuclease 7

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