SMTL ID : 9ctf.1

SapNP Reconstituted Human ABCB1 bound to Taxol in presence of ATP

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

22 x UPL: UNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID(Non-covalent)(Non-functional Binders)

UPL.1: 3 residues within 4Å: Chain A: R.832, N.839 Ligands: UPL.19 Ligand excluded by PLIP UPL.2: 4 residues within 4Å: Chain A: L.67, V.71, Y.117, I.121 Ligand excluded by PLIP UPL.3: 3 residues within 4Å: Chain A: F.200, F.201, I.205 Ligand excluded by PLIP UPL.4: 1 residues within 4Å: Chain A: I.848 Ligand excluded by PLIP UPL.5: 1 residues within 4Å: Chain A: I.205 Ligand excluded by PLIP UPL.6: 4 residues within 4Å: Chain A: F.40, T.55, I.59 Ligands: UPL.10 Ligand excluded by PLIP UPL.7: 1 residues within 4Å: Chain A: G.120 Ligand excluded by PLIP UPL.8: 1 residues within 4Å: Ligands: UPL.17 Ligand excluded by PLIP UPL.9: 3 residues within 4Å: Chain A: Q.856, A.863 Ligands: UPL.12 Ligand excluded by PLIP UPL.10: 2 residues within 4Å: Chain A: R.359 Ligands: UPL.6 Ligand excluded by PLIP UPL.11: 6 residues within 4Å: Chain A: I.719, I.720, G.723, A.727, L.754, L.758 Ligand excluded by PLIP UPL.12: 3 residues within 4Å: Chain A: Y.962 Ligands: UPL.9, UPL.21 Ligand excluded by PLIP UPL.13: 1 residues within 4Å: Chain A: T.202 Ligand excluded by PLIP UPL.14: 3 residues within 4Å: Chain A: L.216, A.220, Y.316 Ligand excluded by PLIP UPL.15: 3 residues within 4Å: Chain A: I.221, V.224, Y.316 Ligand excluded by PLIP UPL.16: 3 residues within 4Å: Chain A: I.868, Y.953, V.982 Ligand excluded by PLIP UPL.17: 4 residues within 4Å: Chain A: L.219, A.229, V.345 Ligands: UPL.8 Ligand excluded by PLIP UPL.18: 4 residues within 4Å: Chain A: F.336, L.339, F.343 Ligands: TA1.24 Ligand excluded by PLIP UPL.19: 3 residues within 4Å: Chain A: F.697, I.719 Ligands: UPL.1 Ligand excluded by PLIP UPL.20: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP UPL.21: 3 residues within 4Å: Chain A: M.948, G.955 Ligands: UPL.12 Ligand excluded by PLIP UPL.22: 2 residues within 4Å: Chain A: T.112, Y.116 Ligand excluded by PLIP

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.23: 10 residues within 4Å: Chain A: D.164, Y.401, S.403, R.404, S.429, G.430, K.433, S.434, E.556, H.587 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:D.164, A:S.403, A:G.430, A:G.430, A:S.434, A:S.434 Salt bridges: A:K.433, A:K.433, A:H.587 pi-Stacking: A:Y.401, A:Y.401

1 x TA1: TAXOL(Non-covalent)

TA1.24: 18 residues within 4Å: Chain A: F.303, Y.307, Y.310, F.343, N.721, Q.725, F.728, A.729, G.763, S.766, F.767, F.770, Q.838, F.983, M.986, A.987, Q.990 Ligands: UPL.18 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.303, A:F.303, A:Y.307, A:Y.310, A:F.343, A:Q.725, A:F.728, A:F.770, A:F.983, A:Q.990, A:Q.990 Hydrogen bonds: A:Y.310, A:Q.725, A:Q.838

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kurre, D. et al., Structural insights into binding-site access and ligand recognition by human ABCB1. Embo J. (2025)

Release Date

2025-01-22

Peptides

ATP-dependent translocase ABCB1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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ATP-dependent translocase ABCB1

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