SMTL ID : 9cun.1

Crystal structure of Ami1 from M. tuberculosis in complex with a tetrazole compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

1 x 01: 5-(2-iodophenyl)-2H-tetrazole

01.1: 12 residues within 4Å: Chain A: D.9, V.83, R.86, I.98, S.100, L.163, A.164, G.165, L.166, S.173, I.174, L.175 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.98, A:L.166, A:L.175, A:L.175 Hydrogen bonds: A:A.164, A:G.165, A:L.166 Water bridges: A:S.100, A:S.100

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: H.12, E.47, H.102, A.103 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.12, A:E.47, A:H.102, H2O.1, H2O.1, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rosas-Cruz, M. et al., Identification of Potential Inhibitors of Mycobacterium tuberculosis Amidases: An Integrated In Silico and Experimental Study. Acs Omega (2024)

Release Date

2024-11-20

Peptides

N-acetylmuramoyl-L-alanine amidase Rv3717: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

N-acetylmuramoyl-L-alanine amidase Rv3717

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