SMTL ID : 9cxt.1

Hemagglutinin A/Hong Kong/1/68 produced in GnTI- cells

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-mer

Ligands

18 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: P.45, N.46 Ligand excluded by PLIP NAG.2: 3 residues within 4Å: Chain A: Q.104, N.105, F.144 Ligand excluded by PLIP NAG.3: 3 residues within 4Å: Chain A: N.62, A.63, T.64 Ligand excluded by PLIP NAG.4: 5 residues within 4Å: Chain A: N.189, T.191, V.268 Chain F: S.243, W.246 Ligand excluded by PLIP NAG.5: 5 residues within 4Å: Chain A: P.308, N.309, V.321, N.322 Chain B: E.70 Ligand excluded by PLIP NAG.6: 4 residues within 4Å: Chain B: A.148, E.151, N.155, T.157 Ligand excluded by PLIP NAG.7: 4 residues within 4Å: Chain C: A.148, E.151, N.155, T.157 Ligand excluded by PLIP NAG.8: 4 residues within 4Å: Chain D: A.148, E.151, N.155, T.157 Ligand excluded by PLIP NAG.9: 2 residues within 4Å: Chain E: P.45, N.46 Ligand excluded by PLIP NAG.10: 3 residues within 4Å: Chain E: Q.104, N.105, F.144 Ligand excluded by PLIP NAG.11: 3 residues within 4Å: Chain E: N.62, A.63, T.64 Ligand excluded by PLIP NAG.12: 4 residues within 4Å: Chain A: W.246 Chain E: N.189, T.191, V.268 Ligand excluded by PLIP NAG.13: 5 residues within 4Å: Chain C: E.70 Chain E: P.308, N.309, V.321, N.322 Ligand excluded by PLIP NAG.14: 2 residues within 4Å: Chain F: P.45, N.46 Ligand excluded by PLIP NAG.15: 3 residues within 4Å: Chain F: Q.104, N.105, F.144 Ligand excluded by PLIP NAG.16: 3 residues within 4Å: Chain F: N.62, A.63, T.64 Ligand excluded by PLIP NAG.17: 4 residues within 4Å: Chain E: W.246 Chain F: N.189, T.191, V.268 Ligand excluded by PLIP NAG.18: 5 residues within 4Å: Chain D: E.70 Chain F: P.308, N.309, V.321, N.322 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de Paiva Froes Rocha, R. et al., Structural and immunological characterization of the H3 influenza hemagglutinin during antigenic drift. To Be Published

Release Date

2025-08-06

Peptides

Hemagglutinin HA1 chain: AEF
Hemagglutinin HA2 chain,Green fluorescent protein fusion: BCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
C

F
E

B
B

C
D

D
F

Hemagglutinin HA1 chain

Hemagglutinin HA2 chain,Green fluorescent protein fusion

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