SMTL ID : 9d1q.1

Lucilia cuprina alpha esterase 7 directed evolution round 6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: D.87 Ligands: MPD.4 No protein-ligand interaction detected (PLIP) EDO.5: 8 residues within 4Å: Chain A: G.135, G.136, I.140, G.141, E.142, M.147, Y.148, Y.457 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.135, A:Y.457 EDO.6: 5 residues within 4Å: Chain A: N.120, P.123, E.124, R.127, D.157 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:E.124, A:R.127, A:R.127 Water bridges: A:N.120, A:T.125, A:D.157, A:D.157

3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 7 residues within 4Å: Chain A: D.137, S.218, W.251, F.309, F.355, Y.420, F.421 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.251, A:F.309, A:F.355, A:F.421 Water bridges: A:D.137, A:S.218 MPD.3: 3 residues within 4Å: Chain A: Y.25, R.26, T.28 No protein-ligand interaction detected (PLIP) MPD.4: 3 residues within 4Å: Chain A: W.82, R.86 Ligands: EDO.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.82, A:R.86 Water bridges: A:D.87

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.7: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Frkic, R.L. et al., Lucilia cuprina alpha esterase 7 directed evolution round 6. To Be Published

Release Date

2025-08-13

Peptides

Carboxylic ester hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carboxylic ester hydrolase