SMTL ID : 9d3w.1

CRYSTAL STRUCTURE OF EGFR(L858R/T790M/C797S) IN COMPLEX WITH AUR-8250

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

monomer

Ligands

1 x 01: (4S)-1-(1,4-dioxaspiro[4.5]decan-8-yl)-N-{2-[(3S,4R)-3-fluoro-4-methoxypiperidin-1-yl]pyrimidin-4-yl}-2-methyl-1H-imidazo[1,2-b]pyrazol-6-amine

01.1: 19 residues within 4Å: Chain A: L.26, G.27, F.31, V.34, A.51, K.53, E.70, M.74, C.83, M.98, Q.99, L.100, M.101, P.102, G.104, S.105, L.152, T.162, D.163 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.26, A:V.34, A:V.34, A:M.98, A:L.152 Hydrogen bonds: A:K.53, A:Q.99, A:M.101, A:T.162

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: W.213, T.217 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: K.257, P.267, E.275 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: Q.243, P.245, C.247 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain A: N.8, Y.72, S.76, R.139, L.169 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Igawa, H. et al., Discovery of a Novel Mutant-Selective Epidermal Growth Factor Receptor Inhibitor Using an In Silico Enabled Drug Discovery Platform. J.Med.Chem. (2024)

Release Date

2025-03-05

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

Related Entries With Identical Sequence