SMTL ID : 9d9i.1

Human Hsp90b nucleotide binding domain in complex with BRI2312

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x 01: (1P)-3-amino-6-[({1-[(2R)-2-(2,4-difluorophenyl)-2-hydroxy-3-(1H-1,2,4-triazol-1-yl)propyl]piperidin-4-yl}amino)methyl]-1-(4-phenyl-3,4-dihydro-2H-1,4-benzoxazin-6-yl)thieno[2,3-b]pyrazin-2(1H)-one

01.1: 21 residues within 4Å: Chain A: N.47, A.48, A.51, K.54, D.89, I.92, G.93, M.94, D.98, L.99, L.103, I.106, A.107, G.131, V.132, F.134, Y.135, V.146, W.158, T.180, V.182 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:K.54, A:L.99, A:L.103, A:I.106, A:F.134, A:W.158 Hydrogen bonds: A:N.47, A:D.89, A:T.180 Water bridges: A:A.48, A:A.48, A:A.51, A:D.89, A:G.93

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: F.18, Q.19, I.22, G.104, F.166 Ligand excluded by PLIP CL.3: 6 residues within 4Å: Chain A: I.55, E.58, K.65, I.92, H.150, N.151 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuntz, D.A. et al., Human Hsp90b nucleotide binding domain in complex with BRI2312. To be published

Release Date

2025-09-10

Peptides

Heat shock protein HSP 90-beta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heat shock protein HSP 90-beta

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