SMTL ID : 9dam.1

A DARPin fused to the 1TEL crystallization chaperone via a direct helical fusion

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.1: 7 residues within 4Å: Chain A: G.132, L.134, H.166, L.167, E.168, I.169 Ligands: MG.6 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:H.166, A:E.168, A:I.169 Hydrogen bonds: A:L.167, A:E.168

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: K.142 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: H.5, H.6, H.7, Y.183 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: L.16, P.17, A.18, R.21 Ligand excluded by PLIP

2 x MG: MAGNESIUM ION(Non-covalent)

MG.5: 5 residues within 4Å: Chain A: I.155, D.184, D.186, H.188, L.193 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.184, A:H.188 MG.6: 4 residues within 4Å: Chain A: G.165, H.166, L.167 Ligands: ACY.1 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:G.165, ACY.1

1 x NA: SODIUM ION(Non-functional Binders)

NA.7: 3 residues within 4Å: Chain A: E.138, V.172, H.176 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pedroza Romo, M.J. et al., Optimal TELSAM-Target Protein Linker Character is Target Protein Dependent. To Be Published

Release Date

2024-10-09

Peptides

Transcription factor ETV6 fused to a DARPin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcription factor ETV6 fused to a DARPin

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