SMTL ID : 9don.1 (1 other biounit)

Crystal structure of eIF4e in complex with Compound 5-PA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

monomer

Ligands

1 x M7G: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE(Non-covalent)

M7G.1: 6 residues within 4Å: Chain A: W.30, M.75, W.76, E.77, R.131, K.136 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:W.76 Water bridges: A:Q.31, A:R.86, A:R.86, A:R.86 Salt bridges: A:E.77, A:R.131, A:R.131, A:K.136, A:K.136 pi-Stacking: A:W.30, A:W.76 pi-Cation interactions: A:W.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cardenas, E.L. et al., Second-Generation Cap Analogue Prodrugs for Targeting Aberrant Eukaryotic Translation Initiation Factor 4E Activity in Cancer. Acs Med.Chem.Lett. (2025)

Release Date

2025-01-29

Peptides

Eukaryotic translation initiation factor 4E: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Eukaryotic translation initiation factor 4E

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