SMTL ID : 9dp4.1 (1 other biounit)

APE1 N174Q Product Complex with Abasic DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 6 residues within 4Å: Chain A: Q.9, T.11, S.12, P.13, L.214, C.254 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.12 Water bridges: A:Q.9

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: E.54, Y.129, D.266 Chain B: N.1 Chain C: C.10 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

DeHart, K.D. et al., N174 Physically and Chemically Stabilizes the APE1 Endonuclease Reaction. To Be Published

Release Date

2024-10-09

Peptides

DNA repair nuclease/redox regulator APEX1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA repair nuclease/redox regulator APEX1

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