SMTL ID : 9dpm.1

BMP-9 Monomer Growth Factor with Cysteinylation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x CYS: CYSTEINE(Non-covalent)

CYS.1: 3 residues within 4Å: Chain A: K.71, A.72, C.73 2 PLIP interactions: 2 Ligand-Ligand interactions Hydrogen bonds: C.1, C.1

3 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: F.65, P.66, T.67, K.68 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.67, A:T.67 NA.3: 1 residues within 4Å: Chain A: Y.97 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.97 Water bridges: A:H.98 NA.4: 4 residues within 4Å: Chain A: R.14, V.15, N.16, D.19 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.16, A:N.16, A:D.19

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 4 residues within 4Å: Chain A: K.96, H.98, Y.99, E.100 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain A: T.52, K.53 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain A: K.96, Y.97, H.98 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schwartze, T.A. et al., Molecular Basis of Interchain Disulfide Bond Formation in BMP-9 and BMP-10. J.Mol.Biol. (2025)

Release Date

2025-01-22

Peptides

Growth/differentiation factor 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Growth/differentiation factor 2

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