SMTL ID : 9du7.1

KEAP1 BTB domain in complex with the covalent activator VVD-065

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

homo-dimer

Ligands

2 x 01: 1-{(3S)-3-[3-(4-amino-1,3,5-triazin-2-yl)-5-chlorophenyl]morpholin-4-yl}propan-1-one

01.1: 10 residues within 4Å: Chain A: Y.42, H.86, K.88, V.89, R.92, G.105, C.108, H.111, V.112 Chain B: T.8 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.42, A:K.88, A:R.92 Water bridges: A:H.86 pi-Stacking: A:H.111 pi-Cation interactions: A:H.111 01.2: 9 residues within 4Å: Chain B: Y.42, H.86, K.88, V.89, R.92, G.105, C.108, H.111, V.112 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:K.88, B:V.89 Hydrogen bonds: B:Y.42, B:Y.42, B:R.92, B:R.92 Water bridges: B:H.86 pi-Stacking: B:H.111 pi-Cation interactions: B:H.111

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roy, N. et al., Suppression of NRF2-dependent cancer growth by a covalent allosteric molecular glue. Biorxiv (2024)

Release Date

2024-10-23

Peptides

Kelch-like ECH-associated protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Kelch-like ECH-associated protein 1

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