SMTL ID : 9e42.2 (1 other biounit)

RTA-RUNT-192 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: P.147, E.150, A.151, T.167, R.170, S.171, I.174, R.201 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.150, A:E.150

1 x 01: 5-(2,6-diethylphenyl)thiophene-2-carboxylic acid

01.2: 10 residues within 4Å: Chain A: Y.187, S.207, L.211, L.236, Q.237, R.238, R.239, F.244, I.251, I.255 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.187, A:L.211, A:L.236, A:F.244, A:I.251, A:I.255 Hydrogen bonds: A:R.239 Water bridges: A:N.240 Salt bridges: A:R.238 pi-Stacking: A:F.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McLaughlin, J.E. et al., Binding of small molecules at the P-stalk site of ricin A subunit trigger conformational changes that extend into the active site. J.Biol.Chem. (2025)

Release Date

2025-05-14

Peptides

Ricin A chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ricin A chain

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