SMTL ID : 9e6s.1

BCL11A ZF4-6 with K784T Mutation in Complex with a DNA Sequence Observed in the Human Globin Locus Containing Motif TGACCA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: C.48, H.61, T.64, F.82 Chain B: T.12 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.64, A:T.64

6 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.17, C.20, H.33, H.37 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.17, A:C.20, A:H.33, A:H.37 ZN.3: 4 residues within 4Å: Chain A: C.45, C.48, H.61, H.65 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.45, A:C.48, A:H.61, A:H.65 ZN.4: 4 residues within 4Å: Chain A: C.75, C.78, H.91, H.96 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.75, A:C.78, A:H.91, A:H.96 ZN.5: 4 residues within 4Å: Chain D: C.17, C.20, H.33, H.37 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.17, D:C.20, D:H.33, D:H.37 ZN.6: 4 residues within 4Å: Chain D: C.45, C.48, H.61, H.65 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.45, D:C.48, D:H.61, D:H.65 ZN.7: 4 residues within 4Å: Chain D: C.75, C.78, H.91, H.96 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.75, D:C.78, D:H.91, D:H.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Horton, J.R. et al., Transcription factor BCL11A utilizes two zinc-finger tandem arrays to bind clustered short sequence motifs. To Be Published

Release Date

2025-04-09

Peptides

B-cell lymphoma/leukemia 11A: AD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
D

B-cell lymphoma/leukemia 11A