SMTL ID : 9ecx.2 (1 other biounit)

Crystal structure of the SARS-CoV-2 NTD-targeted neutralizing antibody WRAIR-2008

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.67 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: V.178, H.179 Chain B: T.169, E.170, D.172 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Salt bridges: A:H.179 Hydrogen bonds: B:E.170, B:D.172 SO4.2: 3 residues within 4Å: Chain B: S.126, D.127, E.128 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.127, B:E.128

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain B: S.10, P.12 1 PLIP interactions: 1 interactions with chain B Water bridges: B:S.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jensen, J.L. et al., Crystal structure of the SARS-CoV-2 NTD-targeted neutralizing antibody WRAIR-2008. To Be Published

Release Date

2025-08-20

Peptides

WRAIR-2008 Fab heavy chain: A
WRAIR-2008 Fab light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

WRAIR-2008 Fab heavy chain

WRAIR-2008 Fab light chain

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