SMTL ID : 9ekv.1

ML-SA5 bound TRPML1 in an open state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x 01: N4-(3-chloranyl-2-piperidin-1-yl-phenyl)-N1,N1-dimethyl-benzene-1,4-disulfonamide

01.1: 14 residues within 4Å: Chain A: F.428, C.429, V.432, A.433, Y.436, F.465, I.468, F.505, V.509, L.510, F.513 Chain D: Y.499, S.503, Y.507 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain D Hydrophobic interactions: A:V.432, A:V.432, A:Y.436, A:F.465, D:Y.499 01.2: 14 residues within 4Å: Chain A: Y.499, S.503, Y.507 Chain B: F.428, C.429, V.432, A.433, Y.436, F.465, I.468, F.505, V.509, L.510, F.513 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:V.432, B:V.432, B:Y.436, B:F.465, A:Y.499 01.3: 14 residues within 4Å: Chain B: Y.499, S.503, Y.507 Chain C: F.428, C.429, V.432, A.433, Y.436, F.465, I.468, F.505, V.509, L.510, F.513 5 PLIP interactions: 4 interactions with chain C, 1 interactions with chain B Hydrophobic interactions: C:V.432, C:V.432, C:Y.436, C:F.465, B:Y.499 01.4: 14 residues within 4Å: Chain C: Y.499, S.503, Y.507 Chain D: F.428, C.429, V.432, A.433, Y.436, F.465, I.468, F.505, V.509, L.510, F.513 5 PLIP interactions: 1 interactions with chain C, 4 interactions with chain D Hydrophobic interactions: C:Y.499, D:V.432, D:V.432, D:Y.436, D:F.465

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schmiege, P. et al., ML-SA5 bound TRPML1 in an open state. To Be Published

Release Date

2025-06-18

Peptides

Mucolipin-1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Mucolipin-1

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