SMTL ID : 9enx.1 (1 other biounit)

Enmetazobactam-Derived GES-1 Acyl-Enzyme

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.23 Å

Oligo State

monomer

Ligands

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID

EPE.1: 10 residues within 4Å: Chain A: S.66, W.101, S.127, T.213, K.231, T.232, G.233, T.234, R.240 Ligands: M9W.5 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:S.127, A:T.213, A:T.232, A:T.232, A:T.234 Water bridges: A:S.127, A:R.240, A:R.240 Salt bridges: A:K.231, A:R.240

3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL

MPD.2: 7 residues within 4Å: Chain A: A.104, F.108, E.118, Q.121, A.122, Q.125, L.126 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Q.121 Hydrogen bonds: A:E.118 MPD.3: 6 residues within 4Å: Chain A: D.29, L.33, S.275, Q.278, V.279, Q.282 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Q.278 Water bridges: A:D.29, A:D.29 MPD.4: 6 residues within 4Å: Chain A: Q.121, Q.125, R.206, W.207, G.210, Q.212 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.125, A:Q.125

1 x M9W: Enmetazobactam derived trans-enamine adduct

M9W.5: 12 residues within 4Å: Chain A: C.65, S.66, K.69, E.100, W.101, S.127, N.129, E.163, P.164, G.233, T.234 Ligands: EPE.1 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.66, A:T.234 Water bridges: A:N.129, A:E.163, A:P.164, A:T.234, A:T.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Beer, M. et al., Enmetazobactam-Derived GES-1 Acyl-Enzyme. To Be Published

Release Date

2025-03-26

Peptides

beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

beta-lactamase

Related Entries With Identical Sequence