SMTL ID : 9eod.1 (1 other biounit)

Human serum albumin with adamantene carboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

2 x MYR: MYRISTIC ACID

MYR.1: 22 residues within 4Å: Chain A: S.366, V.368, L.369, R.372, P.408, L.411, I.412, N.415, C.416, F.427, L.431, Y.435, L.454, V.457, G.458, M.470, A.473, E.474, L.477, R.509, P.510 Ligands: PGE.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.368, A:P.408, A:L.411, A:N.415, A:V.457, A:E.474 Hydrogen bonds: A:S.366 Salt bridges: A:R.372, A:R.509 MYR.2: 18 residues within 4Å: Chain A: Y.425, N.429, F.526, F.531, F.533, K.549, A.552, L.553, L.556, H.559, V.571, M.572, F.575, L.599, V.600, S.603, Q.604, L.607 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.526, A:F.531, A:F.531, A:A.552, A:L.553, A:V.571, A:F.575, A:F.575, A:L.599, A:Q.604 Hydrogen bonds: A:Y.425

1 x PGE: TRIETHYLENE GLYCOL

PGE.3: 14 residues within 4Å: Chain A: Y.435, V.439, V.442, L.447, V.450, L.454, L.477, L.481, L.484, R.509, F.512, S.513, L.515 Ligands: MYR.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.513

2 x PEG: DI(HYDROXYETHYL)ETHER

PEG.4: 9 residues within 4Å: Chain A: R.233, A.237, D.348, L.351, L.355, L.371, A.374, K.375, E.378 No protein-ligand interaction detected (PLIP) PEG.5: 10 residues within 4Å: Chain A: L.159, Y.162, L.163, I.166, L.178, F.181, A.182, Y.185, F.189 Ligands: 01.6 No protein-ligand interaction detected (PLIP)

2 x 01: adamantane-1-carboxylic acid

01.6: 12 residues within 4Å: Chain A: L.139, V.140, R.141, P.142, M.147, Y.162, I.166, Y.185, F.189, L.206, R.210 Ligands: PEG.5 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.162, A:Y.162, A:Y.185 Salt bridges: A:R.141, A:R.210 01.7: 11 residues within 4Å: Chain A: E.41, N.42, A.45, E.156, L.159, K.160, L.163, L.179, A.182, K.183, K.186 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.45, A:L.159, A:K.160, A:L.179, A:A.182, A:K.183, A:K.186 Water bridges: A:A.45 Salt bridges: A:K.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Freitag-Pohl, S. et al., Human serum albumin with myristate. To Be Published

Release Date

2025-03-26

Peptides

Albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Albumin

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