SMTL ID : 9erv.1

Structure of Salmonella CapRel bound to Bas11 Gp54

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: I.74, V.75, A.76, I.117, P.352 Ligands: NA.4 2 PLIP interactions: 2 interactions with chain A Water bridges: A:K.349, A:A.350

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 15 residues within 4Å: Chain A: R.78, K.80, T.84, K.88, D.110, G.113, C.114, R.115, E.179, Q.181, E.195, K.206, A.350, Y.351 Ligands: MG.3 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:T.84, A:R.115, A:R.115, A:E.179, A:Q.181, A:E.195, A:E.195 Water bridges: A:R.183, A:K.206, A:K.206 Salt bridges: A:R.78, A:R.78, A:K.80, A:K.80, A:K.80, A:K.88, A:K.206, A:K.206, A:K.206 pi-Cation interactions: A:R.78, A:R.115

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 2 residues within 4Å: Chain A: D.110 Ligands: ATP.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.110

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 5 residues within 4Å: Chain A: H.188, Y.351, P.352, N.353 Ligands: GOL.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.353

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, T. et al., A bacterial immunity protein directly senses two disparate phage proteins. Nature (2024)

Release Date

2024-11-06

Peptides

RelA/SpoT family protein: A
GP54: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RelA/SpoT family protein

GP54

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