SMTL ID : 9etr.2 (1 other biounit)

Crystal structure of PARP1 catalytic domain bound to AZD9574

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

monomer

Ligands

1 x 01: 6-fluoranyl-5-[4-[(5-fluoranyl-2-methyl-3-oxidanylidene-4~{H}-quinoxalin-6-yl)methyl]piperazin-1-yl]-~{N}-methyl-pyridine-2-carboxamide

01.1: 17 residues within 4Å: Chain A: D.110, N.111, L.113, D.114, W.205, H.206, G.207, S.208, N.212, R.222, I.223, A.224, Y.240, F.241, A.242, S.248, Y.251 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.113, A:Y.240, A:A.242 Hydrogen bonds: A:G.207, A:G.207, A:I.223 Water bridges: A:N.111 pi-Stacking: A:Y.251, A:Y.251 Halogen bonds: A:S.208

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: K.247, L.328, L.329, Y.330 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.329, A:Y.330, A:Y.330 Salt bridges: A:K.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Johannes, J.W. et al., Discovery of 6-Fluoro-5-{4-[(5-fluoro-2-methyl-3-oxo-3,4-dihydroquinoxalin-6-yl)methyl]piperazin-1-yl}- N -methylpyridine-2-carboxamide (AZD9574): A CNS-Penetrant, PARP1-Selective Inhibitor. J.Med.Chem. (2024)

Release Date

2024-12-04

Peptides

Poly [ADP-ribose] polymerase 1, processed C-terminus: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Poly [ADP-ribose] polymerase 1, processed C-terminus

Related Entries With Identical Sequence