SMTL ID : 9f70.1

BAZ2A bromodomain in complex with acetylpyrrole derivative compound 23-TND13

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x 01: 1-[5-[(3~{R})-3-[(1~{R})-1-azanylethyl]piperidin-1-yl]carbonyl-2-methyl-4-propyl-1~{H}-pyrrol-3-yl]ethanone

01.1: 11 residues within 4Å: Chain A: P.24, F.25, E.27, P.28, V.29, V.34, Y.37, F.79, N.80, V.86 Ligands: EDO.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.25, A:E.27, A:V.29, A:V.34, A:Y.37, A:F.79 Hydrogen bonds: A:N.80 Water bridges: A:V.29

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: P.28, V.29, N.30, L.33, V.34 Ligands: 01.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalle Vedove, A. et al., Unusual backfolded binding poses of BAZ2A bromodomain binders. To Be Published

Release Date

2025-05-14

Peptides

Bromodomain adjacent to zinc finger domain protein 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2A

Related Entries With Identical Sequence