SMTL ID : 9feq.1

LSSmOrange (P1) - Directionality of Optical Properties of Fluorescent Proteins

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 6 residues within 4Å: Chain A: F.20, T.21, G.22, D.48, A.49, T.50 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.22, A:T.50, A:T.50 Water bridges: A:A.49

2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.2: 4 residues within 4Å: Chain A: K.169, L.208, P.209, D.210 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.169 PGE.4: 7 residues within 4Å: Chain A: D.31, D.33, K.120, R.122, E.137, L.138, K.139 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.31, A:L.138, A:K.139

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 5 residues within 4Å: Chain A: S.160, G.161, N.162, S.215, Q.217 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.162

2 x CA: CALCIUM ION(Non-functional Binders)(Non-covalent)

CA.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.6: 4 residues within 4Å: Chain A: P.68, W.69, P.70, Y.156 No protein-ligand interaction detected (PLIP)

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.7: 6 residues within 4Å: Chain A: E.108, R.109, T.110, Y.195, Q.196, Q.197 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.108, A:E.108, A:T.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Myskova, J. et al., Directionality of Optical Properties of Fluorescent Proteins. To Be Published

Release Date

2025-06-04

Peptides

wasCFP crystallized in SG P212121: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

wasCFP crystallized in SG P212121