SMTL ID : 9ff6.1

Human transthyretin (TTR) in complex with (E)-4-((((2-methoxybenzyl)oxy)imino)methyl)benzoic acid (Lic157)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-dimer

Ligands

2 x 01: 4-[(~{Z})-(2-methoxyphenyl)methoxyiminomethyl]benzoic acid

01.1: 6 residues within 4Å: Chain A: K.15, L.17, A.108, A.109, L.110, S.117 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.17, A:A.108, A:L.110, A:L.110 Water bridges: A:K.15 Salt bridges: A:K.15 01.4: 7 residues within 4Å: Chain B: K.15, L.17, A.108, A.109, L.110, S.117, T.119 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:L.17, B:A.108, B:L.110, B:L.110 Water bridges: B:K.15 Salt bridges: B:K.15

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain B: I.26, N.27, Y.78, A.81, L.82 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.27, B:Y.78 Water bridges: B:I.26, B:Y.78

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 8 residues within 4Å: Chain A: S.117 Chain B: A.19, L.110, L.111, S.112, S.115, Y.116, S.117 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:S.115, B:Y.116 Water bridges: A:S.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ciccone, L. et al., Human transthyretin (TTR) in complex with (E)-4-((((2-methoxybenzyl)oxy)imino)methyl)benzoic acid (Lic157). To Be Published

Release Date

2025-06-04

Peptides

Transthyretin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transthyretin