SMTL ID : 9fji.1

Two PLK1 PBD proteins bound to CENP-U(58-114) phosphorylated at Thr98

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-2-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: Y.103, D.105, S.108, Y.120 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.103, A:D.105, A:S.108

3 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.2: 5 residues within 4Å: Chain A: C.86, D.87, N.88, N.104, K.150 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.150 Water bridges: A:N.88 PG4.3: 9 residues within 4Å: Chain A: D.34, Q.37, Q.38, S.41, P.203, L.204, M.205, A.206 Ligands: PEG.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.37, A:Q.38 PG4.5: 8 residues within 4Å: Chain B: D.34, Q.37, Q.38, P.203, L.204, M.205, A.206, R.221 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.38, B:R.221

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 2 residues within 4Å: Chain A: S.223 Ligands: PG4.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ren, L. et al., Two PLK1 PBD proteins bound to CENP-U(58-114) phosphorylated at Thr78 and Thr98. To be published

Release Date

2025-09-24

Peptides

Serine/threonine-protein kinase PLK1: AB
Centromere protein U: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Serine/threonine-protein kinase PLK1

Centromere protein U

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