SMTL ID : 9fk6.1

The structure of XT6 from G.proteiniphilus T-6: The E265G/N158D mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

7 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: E.35, E.58, H.322 Ligands: CL.8 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.58, A:E.58, A:H.322, H2O.1 ZN.2: 1 residues within 4Å: Chain A: H.378 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.378, H2O.14 ZN.3: 4 residues within 4Å: Chain A: D.297, A.374, D.377, K.379 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.297, A:A.374, A:D.377, A:K.379, H2O.2 ZN.4: 1 residues within 4Å: Chain A: D.282 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.282, H2O.13 ZN.5: 3 residues within 4Å: Chain A: E.27, S.307, I.310 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.27, A:S.307, A:I.310, H2O.13, H2O.14, H2O.15 ZN.6: 1 residues within 4Å: Chain A: D.21 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.21, H2O.3, H2O.4, H2O.11, H2O.11, H2O.16 ZN.7: 3 residues within 4Å: Chain A: H.11, D.365 Ligands: CL.9 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.11, A:D.365

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.8: 4 residues within 4Å: Chain A: E.58, H.322, W.324 Ligands: ZN.1 Ligand excluded by PLIP CL.9: 3 residues within 4Å: Chain A: H.11, D.365 Ligands: ZN.7 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hadad, N. et al., The structure of XT6 from G.proteiniphilus T-6: The E265G/N158D mutant. To Be Published

Release Date

2025-06-18

Peptides

Endo-1,4-beta-xylanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endo-1,4-beta-xylanase