SMTL ID : 9fkr.1

KAT6A IN COMPLEX WITH SMALL MOLECULE INHIBITOR BAY-184

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.34, C.37, H.50, C.54 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.34, A:C.37, A:H.50, A:C.54 ZN.4: 4 residues within 4Å: Chain B: C.34, C.37, H.50, C.54 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.34, B:C.37, B:H.50, B:C.54

2 x 01: 6-(dimethylamino)-~{N}-(2-phenylphenyl)sulfonyl-1-benzofuran-2-carboxamide

01.2: 14 residues within 4Å: Chain A: F.94, L.95, I.141, M.142, I.143, Q.148, R.149, K.150, G.151, Y.152, G.153, R.154, L.180, S.184 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.143, A:I.143, A:R.149, A:L.180 Hydrogen bonds: A:R.149, A:K.150, A:G.151, A:G.153, A:R.154, A:S.184, A:S.184 01.5: 18 residues within 4Å: Chain B: W.16, F.94, L.95, I.141, M.142, I.143, Q.148, R.149, K.150, G.151, Y.152, G.153, R.154, S.178, L.180, S.184, A.187 Ligands: EPE.6 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:I.143, B:I.143, B:L.180, B:A.187 Hydrogen bonds: B:R.149, B:K.150, B:G.151, B:G.153, B:R.154, B:S.184, B:S.184

2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.3: 6 residues within 4Å: Chain A: R.154, A.187, K.190, S.191, H.250, R.259 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.190, A:K.190, A:S.191 Salt bridges: A:R.154, A:R.259 EPE.6: 6 residues within 4Å: Chain B: R.154, S.191, H.250, L.254, R.259 Ligands: 01.5 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.191 Salt bridges: B:H.250, B:R.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ter Laak, A. et al., Discovery and Characterization of BAY-184: A New Potent and Selective Acylsulfonamide-Benzofuran In Vivo -Active KAT6AB Inhibitor. J.Med.Chem. (2024)

Release Date

2024-11-06

Peptides

Histone acetyltransferase KAT6A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Histone acetyltransferase KAT6A