SMTL ID : 9fp6.1

Structure of the NbNRC2 hexameric resistosome

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-hexamer

Ligands

6 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 18 residues within 4Å: Chain A: V.149, E.150, D.153, V.154, V.155, F.157, P.184, G.185, L.186, G.187, K.188, T.189, T.190, R.293, L.322, P.352, L.353, V.356 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:E.150, A:V.155, A:V.155, A:G.185, A:G.187, A:K.188, A:T.189, A:T.189, A:T.190, A:T.190 Salt bridges: A:K.188, A:K.188, A:R.293 ATP.2: 18 residues within 4Å: Chain B: V.149, E.150, D.153, V.154, V.155, F.157, G.185, L.186, G.187, K.188, T.189, T.190, R.293, L.322, P.352, L.353, V.356, L.395 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:E.150, B:V.155, B:V.155, B:G.185, B:G.187, B:K.188, B:T.189, B:T.189, B:T.190, B:T.190 Salt bridges: B:K.188, B:K.188, B:R.293 ATP.3: 17 residues within 4Å: Chain C: V.149, E.150, D.153, V.154, V.155, F.157, G.185, L.186, G.187, K.188, T.189, T.190, R.293, L.322, P.352, L.353, V.356 14 PLIP interactions: 14 interactions with chain C Hydrogen bonds: C:E.150, C:V.155, C:V.155, C:G.185, C:L.186, C:G.187, C:K.188, C:T.189, C:T.189, C:T.190, C:T.190 Salt bridges: C:K.188, C:K.188, C:R.293 ATP.4: 18 residues within 4Å: Chain D: V.149, E.150, D.153, V.154, V.155, F.157, P.184, G.185, L.186, G.187, K.188, T.189, T.190, R.293, L.322, P.352, L.353, V.356 13 PLIP interactions: 13 interactions with chain D Hydrogen bonds: D:E.150, D:V.155, D:V.155, D:G.185, D:G.187, D:K.188, D:T.189, D:T.189, D:T.190, D:T.190 Salt bridges: D:K.188, D:K.188, D:R.293 ATP.5: 18 residues within 4Å: Chain E: V.149, E.150, D.153, V.154, V.155, F.157, G.185, L.186, G.187, K.188, T.189, T.190, R.293, L.322, P.352, L.353, V.356, L.395 13 PLIP interactions: 13 interactions with chain E Hydrogen bonds: E:E.150, E:V.155, E:V.155, E:G.185, E:G.187, E:K.188, E:T.189, E:T.189, E:T.190, E:T.190 Salt bridges: E:K.188, E:K.188, E:R.293 ATP.6: 18 residues within 4Å: Chain F: V.149, E.150, D.153, V.154, V.155, F.157, G.185, L.186, G.187, K.188, T.189, T.190, R.293, L.322, P.352, L.353, V.356, L.395 13 PLIP interactions: 13 interactions with chain F Hydrogen bonds: F:E.150, F:V.155, F:V.155, F:G.185, F:G.187, F:K.188, F:T.189, F:T.189, F:T.190, F:T.190 Salt bridges: F:K.188, F:K.188, F:R.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Madhuprakash, J. et al., A disease resistance protein triggers oligomerization of its NLR helper into a hexameric resistosome to mediate innate immunity. Sci Adv (2024)

Release Date

2024-07-03

Peptides

NRC2a: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

NRC2a