SMTL ID : 9ftf.1

Crystal structure of the Connecting Domain of the Nipah virus Large protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: S.44, N.47, S.50 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.44, A:S.50, H2O.4, H2O.6 MG.2: 2 residues within 4Å: Chain A: D.32, D.34 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.34, H2O.1 MG.3: 2 residues within 4Å: Chain A: Q.173, E.175 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:Q.173, A:E.175, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Balikci, E. et al., Structure of the Nipah virus polymerase complex. Embo J. (2025)

Release Date

2025-01-08

Peptides

RNA-directed RNA polymerase L: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-directed RNA polymerase L