SMTL ID : 9fzo.1

Pseudomonas aeruginosa penicillin binding protein 3 in complex with ceftazidime

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x CAZ: ACYLATED CEFTAZIDIME(Covalent)

CAZ.1: 17 residues within 4Å: Chain A: E.242, G.244, S.245, V.284, S.300, N.302, G.359, Y.360, K.435, S.436, G.437, T.438, A.439, R.440, Y.454, F.484, G.485 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:V.284, A:T.438, A:Y.454, A:F.484, A:F.484 Hydrogen bonds: A:E.242, A:S.245, A:S.300, A:N.302, A:T.438, A:T.438, A:T.438, A:T.438, A:R.440, A:G.485 Water bridges: A:E.242, A:K.435, A:S.436, A:S.436, A:R.440, A:R.440, A:Y.454, A:Y.454, A:Y.483, A:G.486 Salt bridges: A:K.435, A:R.440

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: Y.180, R.184 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.184, A:R.184 Salt bridges: A:R.184 SO4.3: 1 residues within 4Å: Chain A: R.346 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.346, A:R.346 Salt bridges: A:R.346 SO4.4: 1 residues within 4Å: Chain A: R.177 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.177 SO4.5: 4 residues within 4Å: Chain A: F.133, W.136, L.170, T.388 2 PLIP interactions: 2 interactions with chain A Water bridges: A:T.388, A:R.389 SO4.6: 1 residues within 4Å: Chain A: R.392 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.392

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smith, H.G. et al., Structural basis of Pseudomonas aeruginosa penicillin binding protein 3 inhibition by the siderophore-antibiotic cefiderocol. Chem Sci (2024)

Release Date

2024-10-09

Peptides

Peptidoglycan D,D-transpeptidase FtsI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidoglycan D,D-transpeptidase FtsI

Related Entries With Identical Sequence