SMTL ID : 9g0w.1

auxin transporter PIN8 as asymmetric dimer (inward/outward) with 2,4-D bound in the inward vestibule prebinding state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

1 x CFA: (2,4-DICHLOROPHENOXY)ACETIC ACID(Non-covalent)

CFA.1: 14 residues within 4Å: Chain B: V.47, A.48, I.52, N.118, L.120, I.121, Y.151, A.264, S.267, L.268, G.327, V.328, V.329 Ligands: DMS.2 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:I.52, B:V.328 Hydrogen bonds: B:N.118, B:Y.151, B:V.328

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 7 residues within 4Å: Chain B: N.44, A.48, F.271, V.328, F.331, V.332 Ligands: CFA.1 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.44

1 x DLP: 1,2-DILINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)

DLP.3: 20 residues within 4Å: Chain A: L.24, L.32, L.34 Chain B: K.49, F.50, P.53, L.54, F.57, I.220, I.221, P.223, Y.226, A.227, I.230, W.234, W.243, L.245, P.246, I.249, I.253 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:L.54, B:I.230, B:W.234, B:L.245, B:P.246, B:I.249

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schulz, L. et al., Transport of herbicides by PIN-FORMED auxin transporters. Biorxiv (2024)

Release Date

2025-04-09

Peptides

Auxin efflux carrier component 8: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Membrane

We predict this structure to be a membrane protein.
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Auxin efflux carrier component 8

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