SMTL ID : 9g50.1

TRPC5 in complex with photoswitch Z-AzHC

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.172, C.176, C.178, E.180, C.181 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.172, A:C.176, A:C.178, A:C.181 ZN.3: 4 residues within 4Å: Chain B: H.172, C.176, C.178, C.181 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.172, B:C.176, B:C.178, B:C.181 ZN.5: 4 residues within 4Å: Chain C: H.172, C.176, C.178, C.181 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.172, C:C.176, C:C.178, C:C.181 ZN.7: 4 residues within 4Å: Chain D: H.172, C.176, C.178, C.181 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:H.172, D:C.176, D:C.178, D:C.181

4 x 01: 8-[3-chloranyl-4-[(~{Z})-phenyldiazenyl]phenoxy]-7-[(4-chlorophenyl)methyl]-3-methyl-1-(3-oxidanylpropyl)purine-2,6-dione

01.2: 13 residues within 4Å: Chain A: L.521, Y.524, F.569, L.572, Q.573, F.576, W.577 Chain D: F.599, A.602, T.603, G.606, T.607, V.614 10 PLIP interactions: 2 interactions with chain D, 8 interactions with chain A Hydrophobic interactions: D:V.614, D:V.614, A:L.521, A:Y.524, A:Y.524, A:F.569, A:L.572 Hydrogen bonds: A:Q.573 pi-Stacking: A:F.576, A:F.576 01.4: 14 residues within 4Å: Chain A: F.599, A.602, T.603, G.606, T.607, V.614 Chain B: L.521, Y.524, F.569, L.572, Q.573, F.576, W.577, L.617 13 PLIP interactions: 11 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:L.521, B:Y.524, B:Y.524, B:F.569, B:L.572, B:F.576, B:L.617, A:V.614, A:V.614 Hydrogen bonds: B:R.557, B:Q.573 pi-Stacking: B:F.576, B:F.576 01.6: 15 residues within 4Å: Chain B: F.599, A.602, T.603, G.606, T.607, V.614 Chain C: L.521, Y.524, R.557, F.569, L.572, Q.573, F.576, W.577, V.579 11 PLIP interactions: 9 interactions with chain C, 2 interactions with chain B Hydrophobic interactions: C:Y.524, C:F.569, C:L.572, C:F.576, C:V.579, B:V.614, B:V.614 Hydrogen bonds: C:R.557, C:Q.573 pi-Stacking: C:F.576, C:F.576 01.8: 16 residues within 4Å: Chain C: F.599, A.602, T.603, G.606, T.607, V.614 Chain D: L.521, Y.524, R.557, F.569, L.572, Q.573, F.576, W.577, V.579, L.617 11 PLIP interactions: 10 interactions with chain D, 1 interactions with chain C Hydrophobic interactions: D:Y.524, D:Y.524, D:F.569, D:L.572, D:F.576, D:V.579, D:L.617, C:V.614 Hydrogen bonds: D:R.557 pi-Stacking: D:F.576, D:F.576

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Muller, M. et al., Ideal efficacy photoswitches for TRPC4/5 channels harness high potency for spatiotemporally-resolved control of TRPC function in live tissues. To Be Published

Release Date

2025-07-30

Peptides

Short transient receptor potential channel 5: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Short transient receptor potential channel 5