SMTL ID : 9g5z.1

Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.43 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: Q.33, R.37, T.60, G.61, R.62 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.33, A:R.37, A:R.37, A:G.61 GOL.3: 4 residues within 4Å: Chain B: Q.33, T.60, G.61, R.62 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.60, B:T.60, B:G.61, B:R.62

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: S.26, V.28 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prolic-Kalinsek, M. et al., Staphylococcus aureus MazF in complex with Nanobody 11. To Be Published

Release Date

2024-07-24

Peptides

Endoribonuclease MazF: AB
Nanobody 11: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Endoribonuclease MazF

Nanobody 11

Related Entries With Identical Sequence