SMTL ID : 9gbh.1

CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH COMPOUND1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

monomer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)

NAG.1: 2 residues within 4Å: Chain A: N.82, T.85 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.82 NAG.2: 6 residues within 4Å: Chain A: N.59, T.61, E.62, D.139, T.140 Ligands: NAG.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.139 NAG.3: 1 residues within 4Å: Ligands: NAG.2 No protein-ligand interaction detected (PLIP)

1 x 01: 2-(3,4-dimethoxyphenyl)-3,5-bis(oxidanylidene)-4-[[3-(trifluoromethyl)phenyl]methyl]-1,2,4-triazine-6-carboxylic acid

01.4: 13 residues within 4Å: Chain A: S.84, T.85, L.86, A.177, F.178, K.179, V.196, S.197, Y.198, G.199, R.200, S.201, A.207 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.86, A:F.178, A:F.178, A:Y.198, A:Y.198 Hydrogen bonds: A:K.179, A:G.199 Water bridges: A:S.201, A:S.201 Salt bridges: A:K.179

1 x ZN: ZINC ION(Non-covalent)

ZN.5: 3 residues within 4Å: Chain A: H.10, E.64, T.66 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.10, A:E.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Furstner, C. et al., Discovery and Preclinical Characterization of Fulacimstat (BAY 1142524), a Potent and Selective Chymase Inhibitor As a New Profibrinolytic Approach for Safe Thrombus Resolution. J.Med.Chem. (2024)

Release Date

2024-11-27

Peptides

Chymase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Chymase

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