SMTL ID : 9gbv.1

E.coli gyrase holocomplex with chirally wrapped 217 bp DNA fragment

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain D: D.499, D.501, K.741 Chain E: A.111, A.112 No protein-ligand interaction detected (PLIP) MG.2: 5 residues within 4Å: Chain C: E.425, D.499, K.741 Chain F: T.99, G.100 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:D.499

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Michalczyk, E. et al., Structure of Escherichia coli DNA gyrase with chirally wrapped DNA supports ratchet-and-pawl mechanism for an ATP-powered supercoiling motor. Proceedings of the National Academy of Sciences USA (2024)

Release Date

2024-08-21

Peptides

DNA gyrase subunit A: AB
DNA gyrase subunit B: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
B

D
D

DNA gyrase subunit A

DNA gyrase subunit B

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