SMTL ID : 9gc1.1

CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH COMPOUND8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: N.59, T.61, E.62, T.140 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: N.82, T.85 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.82 Water bridges: A:T.85

1 x 01: 1-(4-methoxyphenyl)-3-[[2-methyl-3-(trifluoromethyl)phenyl]methyl]-2,4-bis(oxidanylidene)pyrimidine-5-carboxylic acid

01.3: 14 residues within 4Å: Chain A: S.84, T.85, L.86, A.177, F.178, K.179, S.182, V.196, S.197, Y.198, G.199, R.200, S.201, A.207 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.178, A:Y.198, A:Y.198 Hydrogen bonds: A:K.179, A:G.199 Salt bridges: A:K.179 Halogen bonds: A:F.178

2 x ZN: ZINC ION(Non-covalent)

ZN.4: 2 residues within 4Å: Chain A: H.10, E.64 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.10, A:E.64, A:E.64 ZN.5: 3 residues within 4Å: Chain A: C.7, R.12, E.143 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Furstner, C. et al., Discovery and Preclinical Characterization of Fulacimstat (BAY 1142524), a Potent and Selective Chymase Inhibitor As a New Profibrinolytic Approach for Safe Thrombus Resolution. J.Med.Chem. (2024)

Release Date

2024-11-27

Peptides

Chymase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Chymase

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