SMTL ID : 9gcd.1

CRYSTAL STRUCTURE OF HUMAN CHYMASE IN COMPLEX WITH Fulacimstat (COMPOUND86)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN.1: 2 residues within 4Å: Chain A: N.82, T.85 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 5 residues within 4Å: Chain A: N.59, T.61, E.62, D.139, T.140 No protein-ligand interaction detected (PLIP)

1 x 01: 1-(3-methyl-2-oxidanylidene-1,3-benzoxazol-6-yl)-2,4-bis(oxidanylidene)-3-[(1R)-4-(trifluoromethyl)-2,3-dihydro-1H-inden-1-yl]pyrimidine-5-carboxylic acid

01.3: 15 residues within 4Å: Chain A: S.84, T.85, L.86, F.157, A.177, F.178, K.179, S.182, V.196, S.197, Y.198, G.199, R.200, S.201, A.207 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.86, A:F.178, A:Y.198, A:Y.198 Hydrogen bonds: A:K.179, A:G.199 Water bridges: A:D.159, A:Y.198 Salt bridges: A:K.179 pi-Stacking: A:Y.198 Halogen bonds: A:F.178

1 x ZN: ZINC ION(Non-covalent)

ZN.4: 2 residues within 4Å: Chain A: H.10, E.64 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.10, A:E.64, A:E.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Furstner, C. et al., Discovery and Preclinical Characterization of Fulacimstat (BAY 1142524), a Potent and Selective Chymase Inhibitor As a New Profibrinolytic Approach for Safe Thrombus Resolution. J.Med.Chem. (2024)

Release Date

2024-11-27

Peptides

Chymase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Chymase

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