SMTL ID : 9ggm.1

Cryo-EM structure of KBTBD4 P313PRR mutant-HDAC2 2:2 complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain B: D.177, H.179, D.265 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.177, B:D.177, B:H.179, B:D.265 ZN.2: 3 residues within 4Å: Chain D: D.177, H.179, D.265 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:D.177, D:D.177, D:H.179, D:D.265

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Z. et al., Structural mimicry of UM171 and neomorphic cancer mutants co-opts E3 ligase KBTBD4 for HDAC1/2 recruitment. Nat Commun (2025)

Release Date

2025-04-09

Peptides

Isoform 1 of Kelch repeat and BTB domain-containing protein 4: AC
Histone deacetylase 2: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
D

D
B

Isoform 1 of Kelch repeat and BTB domain-containing protein 4

Histone deacetylase 2

Related Entries With Identical Sequence