SMTL ID : 9gmt.1

Mtb PNPase Rv2783c Mutant L328F

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-trimer

Ligands

3 x 01: 1-[[4-[4-[[2-phenyl-5-(trifluoromethyl)-1,3-oxazol-4-yl]carbonylamino]phenyl]phenyl]carbonylamino]cyclopentane-1-carboxylic acid

01.1: 17 residues within 4Å: Chain A: I.299, K.303, F.325, R.326, Y.408, F.410, R.427, H.431, S.462, N.463, G.464, S.465, T.466, G.523, A.524, F.528 Chain D: A.9 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:K.303, A:F.325, A:R.326, A:F.410, A:F.410, A:A.524 Hydrogen bonds: A:G.464, A:S.465, A:T.466, A:S.467 01.2: 14 residues within 4Å: Chain B: K.303, F.325, R.326, Y.408, F.410, H.431, S.462, N.463, G.464, S.465, T.466, G.523, A.524 Chain D: A.14 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:K.303, B:R.326 Hydrogen bonds: B:G.464, B:S.465, B:T.466, B:T.466 01.3: 15 residues within 4Å: Chain C: K.303, F.325, R.326, Y.408, F.410, H.431, S.462, N.463, G.464, S.465, T.466, G.523, A.524, F.528 Chain D: A.4 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:R.326 Hydrogen bonds: C:G.464, C:S.465, C:T.466, C:T.466

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Griesser, T. et al., Selective inhibition of Mycobacterium tuberculosis GpsI unveils a novel strategy to target the RNA metabolism. Nucleic Acids Res. (2025)

Release Date

2025-06-25

Peptides

Polyribonucleotide nucleotidyltransferase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Polyribonucleotide nucleotidyltransferase