SMTL ID : 9gng.1

mouse VDAC1 in complex with MPD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 5 residues within 4Å: Chain A: F.30, K.248, V.249, N.250, L.254 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.30, A:K.248, A:L.254 Hydrogen bonds: A:K.248

1 x PX4: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)

PX4.2: 6 residues within 4Å: Chain A: L.192, F.202, S.205, I.206, L.220, W.222 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.192, A:F.202, A:I.206, A:I.206, A:W.222

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Conti Nibali, S. et al., Protocol for high-yield bacterial expression and purification of the voltage-dependent anion channel 1 for high-throughput biophysical assays. STAR Protoc (2025)

Release Date

2025-01-08

Peptides

Isoform Mt-VDAC1 of Non-selective voltage-gated ion channel VDAC1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Isoform Mt-VDAC1 of Non-selective voltage-gated ion channel VDAC1

Related Entries With Identical Sequence